ABOUT THIS RECORDspecies: Ovis aries
miRNA family: miR-548f
source: miRNEST
Taxonomy by NCBI:
Ovis aries Ovis Caprinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AAAAACTGTAATTAATCTTAA miRNA* AAGATAATTACAGGTTTTAT mismatches: 3 bulges: 1 |
pre-miRNA
TATTATAAAAACTGTAATTAATCTTAAAAGGTTATATAGAAAAAAGTAAAACTTAAGCACAAAAGAATATAATGCAATATTGCATATATAGTCAAAAGAT
AATTACAGGTTTTATTAC
dot-bracket secondary structure
....((((((.(((((((((.((((...(((((.(((........))).)))))..........((.(((((((((....))))).)))).))..)))))
)))))))).))))))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TATTATAAAAACTGTAATTAATCTTAAAAGGTTATATAGAAAAAAGTAAAACTTAAGCACAAAAGAATATAATGCAATATTGCATATATAGTCAAAAGAT
AATTACAGGTTTTATTAC
dot-bracket secondary structure
....((((((.(((((((((.((((...(((((.(((........))).)))))..........((.(((((((((....))))).)))).))..)))))
)))))))).))))))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
