ABOUT THIS RECORDspecies: Ovis aries
miRNA family: mir-144
source: miRNEST
Taxonomy by NCBI:
Ovis aries Ovis Caprinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTACAGTATAGATGATGTACTC miRNA* GGATATCATCATATACTGTAAGT mismatches: 3 bulges: 1 |
pre-miRNA
GCCCTGACTGGGATATCATCATATACTGTAAGTTTGTGATGAGATACTACAGTATAGATGATGTACTCGTCCGGG
dot-bracket secondary structure
.(((.(((.((.((((((((.(((((((((..(((.....)))....))))))))))))))))).)).))).)))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GCCCTGACTGGGATATCATCATATACTGTAAGTTTGTGATGAGATACTACAGTATAGATGATGTACTCGTCCGGG
dot-bracket secondary structure
.(((.(((.((.((((((((.(((((((((..(((.....)))....))))))))))))))))).)).))).)))
SIMILARITIES| miRBase mml-mir-144: 5e-30 PMRD no hits microPC no hits | UniProt no hits RFAM mir-144: 8e-29 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
