ABOUT THIS RECORDspecies: Ovis aries
miRNA family: miR-421
source: miRNEST
Taxonomy by NCBI:
Ovis aries Ovis Caprinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTCATTAAATGTTTGTTGAAT miRNA* CAACAGACATTAATTGGGCG mismatches: 4 bulges: 0 |
pre-miRNA
TGCACATTGTAGGCCTCATTAAATGTTTGTTGAATGAAAAAATGAATCATCAACAGACATTAATTGGGCGCCTGCTCTGTG
dot-bracket secondary structure
..((((..((((((((((...((((((((((((.(((.........)))))))))))))))...)))).))))))..))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGCACATTGTAGGCCTCATTAAATGTTTGTTGAATGAAAAAATGAATCATCAACAGACATTAATTGGGCGCCTGCTCTGTG
dot-bracket secondary structure
..((((..((((((((((...((((((((((((.(((.........)))))))))))))))...)))).))))))..))))
SIMILARITIES| miRBase hsa-mir-421: 4e-40 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: cfa-mir-421 from miRBase (MNEST026839) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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