ABOUT THIS RECORDspecies: Ovis aries
miRNA family: miR-301
source: miRNEST
Taxonomy by NCBI:
Ovis aries Ovis Caprinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCTCTGACTTTATTGCACACC miRNA* TGTGCAGCAAATGTGGGAAAGA mismatches: 5 bulges: 1 |
pre-miRNA
TGCGCTGAATGTGGGAAATTCTTTAGTCGAAGCTCTGACTTTATTGCACACCAGAGAGTTCACACAGGTGAAAGGCCTTTTGTGTGCAGCAAATGTGGGA
AAGATTTCATCAGAACCTCCCACCTTGTTCGG
dot-bracket secondary structure
....((((((((((((..((((..((((.....(((.(((((.((((((((.((((..(((((....)))))....)))).)))))))).))).)).)))
..)))).....))))..))))))...))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGCGCTGAATGTGGGAAATTCTTTAGTCGAAGCTCTGACTTTATTGCACACCAGAGAGTTCACACAGGTGAAAGGCCTTTTGTGTGCAGCAAATGTGGGA
AAGATTTCATCAGAACCTCCCACCTTGTTCGG
dot-bracket secondary structure
....((((((((((((..((((..((((.....(((.(((((.((((((((.((((..(((((....)))))....)))).)))))))).))).)).)))
..)))).....))))..))))))...))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|P52741|ZN134_HUMAN: 9e-20 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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