miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST007112
species: Branchiostoma floridae
miRNA family: miR-4308
source: miRNEST

Taxonomy by NCBI:
Branchiostoma floridae Branchiostoma Branchiostomidae Cephalochordata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ACCCTGGTGTTTCTTCTTGTT

miRNA*
 CTGGAGATCGCCAGGGATG

mismatches: 3
bulges: 2
View larger
pre-miRNA
 AGATGAAGACGACCCTGGTGTTTCTTCTTGTTGTCCTGGTCATCTCGTCCCAGCTGATGACCACTGAAGGACACTTTAGGCTTGGCCGAGGCATGGAACG
TGGTGCCGAGACTATCAAGGCGATGTTGGCCCGCCAGGCTGAGCGCCGTGAGCTGGCCAGGGAGCTGGAGATCGCCAGGGATGTGGAGAAG

dot-bracket secondary structure
........(((.((((((((..(((((..(((....((((((((..((....)).))))))))((((((....)))))).(((((((..(((((......
..))))).((....(((.((((...((((((.....)))))).)))).))).))))))))).))).))))).)))))))).))).......


SIMILARITIES
miRBase bfl-mir-4883: 4e-17

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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