ABOUT THIS RECORDspecies: Bombyx mori
miRNA family: mir-2807
source: miRNEST
Taxonomy by NCBI:
Bombyx mori Bombyx Bombycinae Bombycidae Bombyciformes Bombycoidea Obtectomera Ditrysia Heteroneura Neolepidoptera Glossata Lepidoptera Amphiesmenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CACCTGCATACAAAATTGGGT miRNA* CTCATATTTGTATGGAGTGGG mismatches: 4 bulges: 2 |
pre-miRNA
AGTGCGAGTTTTTCAACATTCTCCATAGCGCAAAAGTTAGCTCATATTTGTATGGAGTGGGATCGTTTGCCTACGTTTGCCGTTAAGGGCGCTGTTCCCA
CCTGCATACAAAATTGGGTAACCCTTACGCTATCGAGAACGCTAAAAAAATCGCAC
dot-bracket secondary structure
.((((((.(((((.....(((((.((((((.((..((((.((((..((((((((..((((((.((..((((((((.....)))...))))).)).)))))
)...))))))))..))))))))..)).)))))).))))).....))))).))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AGTGCGAGTTTTTCAACATTCTCCATAGCGCAAAAGTTAGCTCATATTTGTATGGAGTGGGATCGTTTGCCTACGTTTGCCGTTAAGGGCGCTGTTCCCA
CCTGCATACAAAATTGGGTAACCCTTACGCTATCGAGAACGCTAAAAAAATCGCAC
dot-bracket secondary structure
.((((((.(((((.....(((((.((((((.((..((((.((((..((((((((..((((((.((..((((((((.....)))...))))).)).)))))
)...))))))))..))))))))..)).)))))).))))).....))))).))))))
SIMILARITIES| miRBase bmo-mir-2807d: 0.000000000000002 PMRD no hits microPC no hits | UniProt no hits RFAM mir-2807: 1e-26 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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