ABOUT THIS RECORDspecies: Bombyx mori
miRNA family: mir-31
source: miRNEST
Taxonomy by NCBI:
Bombyx mori Bombyx Bombycinae Bombycidae Bombyciformes Bombycoidea Obtectomera Ditrysia Heteroneura Neolepidoptera Glossata Lepidoptera Amphiesmenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGCAAGAAGTCGGCATAGCTG miRNA* GCTGTGTCACTTCGAGCCAG mismatches: 2 bulges: 1 |
pre-miRNA
CACCACAAGAAGTCGAGCCGGTGGCTGGGAAGGCAAGAAGTCGGCATAGCTGTTTGAATAAGATACACGGCTGTGTCACTTCGAGCCAGCTCAATCCGCC
GGCTTTCTTCAATTTCA
dot-bracket secondary structure
........((((..((((((((((.((((..(((..(((((.(((((((((((.((.......)).))))))))))))))))..)))..))))..)))))
))))).)))).......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CACCACAAGAAGTCGAGCCGGTGGCTGGGAAGGCAAGAAGTCGGCATAGCTGTTTGAATAAGATACACGGCTGTGTCACTTCGAGCCAGCTCAATCCGCC
GGCTTTCTTCAATTTCA
dot-bracket secondary structure
........((((..((((((((((.((((..(((..(((((.(((((((((((.((.......)).))))))))))))))))..)))..))))..)))))
))))).)))).......
SIMILARITIES| miRBase bmo-mir-31: 2e-55 PMRD no hits microPC no hits | UniProt no hits RFAM mir-31: 1e-38 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
