miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST007221
species: Oncorhynchus mykiss
miRNA family: mir-25
source: miRNEST

Taxonomy by NCBI:
Oncorhynchus mykiss Oncorhynchus Salmoninae Salmonidae Salmonoidei Salmoniformes Protacanthopterygii Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TATTGCACTTGTCCCGGCCTG

miRNA*
GGTTGGGAGGGGTGTCAGTGCT

mismatches: 1
bulges: 1

View larger
pre-miRNA
AAGTCAGTCCCGGTCCTGGTCAGGTTGGGAGGGGTGTCAGTGCTGTTACTCTGAAGGTATTGCACTTGTCCCGGCCTGTTTAGGATTGAGGAGATGG

dot-bracket secondary structure
..(((..((((((((((((.((((((((((.(((((.(((((((.((.....)).)))))))))))).)))))))))).))))))))).))))))..


SIMILARITIES
miRBase xla-mir-92a-1: 0.0000000003

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-92: 0.00000002
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;