ABOUT THIS RECORD

ID: MNEST007226
species: Oncorhynchus mykiss
miRNA family: mir-126
source: miRNEST

Taxonomy by NCBI:
Oncorhynchus mykiss Oncorhynchus Salmoninae Salmonidae Salmonoidei Salmoniformes Protacanthopterygii Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
TGCTTTACGGTCCATTTATACTTTTGGTACGCGCTAAGCCAGTCTCAAACTCGTACCGTGAGTAATAATGCACTGTGGCTG

dot-bracket secondary structure
.(((..(((((.((((..(((((.(((((((.((...)).(((.....)))))))))).)))))..)))).))))))))..


SIMILARITIES

miRBase dre-mir-126a: 3e-25 PMRD no hits microPC no hits

UniProt no hits RFAM mir-126: 9e-26

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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