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ABOUT THIS RECORD

ID: MNEST007235
species: Oncorhynchus mykiss
miRNA family: mir-1322
source: miRNEST

Taxonomy by NCBI:
Oncorhynchus mykiss Oncorhynchus Salmoninae Salmonidae Salmonoidei Salmoniformes Protacanthopterygii Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCTGCTGCTGCTGATGGTCTC

miRNA*
GCACTATCTCAACGGGAGCGA

mismatches: 4
bulges: 2

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pre-miRNA
GTTCTTCACCCAGCACTATCTCAACGGGAGCGAGCCCACCGACCACAACATTGCTGCTGCTGCTGATGGTCTCATCAATGAA

dot-bracket secondary structure
..............((((((.((.(((.(((((.................))))).))).))..)))))).(((....))).


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|A3KPW9|BAG6_DANRE: 0.0002

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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