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ABOUT THIS RECORD

ID: MNEST007241
species: Oncorhynchus mykiss
miRNA family: mir-379
source: miRNEST

Taxonomy by NCBI:
Oncorhynchus mykiss Oncorhynchus Salmoninae Salmonidae Salmonoidei Salmoniformes Protacanthopterygii Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AATGTAGTATGGTCCAAATCT

miRNA*
GTTGGAGACCATGCTCATGAA

mismatches: 3
bulges: 2

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pre-miRNA
ATCACAGGCTCAATGTAGTATGGTCCAAATCTCCTCTCATACAGCAGGTTGGAGACCATGCTCATGAATGTCTTGG

dot-bracket secondary structure
.....((((...(((.(((((((((..(((((.((.......)).)))))...))))))))))))....))))...


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|O73817|PSB3_ONCMY: 0.0000004

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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