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ABOUT THIS RECORD
ID:
MNEST007381
species:
Solanum tuberosum
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Solanum tuberosum
Solanum
Solaneae
Solanoideae
Solanaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GTACTCCCTCCGTCCCTATTT
miRNA*
AAAGGGACGGAGGGAGTAATA
mismatches:
2
bulges:
0
View larger
pre-miRNA
AAAATAGACAG
GTACTCCCTCCGTCCCTATTT
ACTTGTCCATATTTCCTTTTTTGGTTGTCCCTATTTAGTTGTCCATTTTGACAAATCAAGAAAGGACA
ACAAATTTTTTCCTATTATACCCTTATTTACACTTCTTGAAAATTGTAAAAGTGTATGTTGTTTCCCTCCAATTTATTTCACTTGAATTCAAATAAGTGG
TTGTAATTTTGAAGTGAAAAGTTGTCATAAGGGTAAAATTGTAACTTCACTGTGCTAATCATTGTTGCCTTAATCTGTGTGCCATTTCTAAAGTGGACAA
CTAA
AAAGGGACGGAGGGAGTAATA
TATATACA
dot-bracket secondary structure
...........
.((((((((((((((((.(((
(.((((((((.((........((((.........((((((((((.((((((....))))))..)))))
)).(((((..........(((((((((.(((((((.(((.......)))))))))).(...((((.((.(((.((((.(((((((........)))))))
..))))..))).)).))))...)...))))))))))))))(((((......(((.....))).)))))..))).......)))).....)).))))))))
.)))
).))))))))))))))))...
........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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