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ABOUT THIS RECORD
ID:
MNEST007392
species:
Solanum tuberosum
miRNA family:
MIRf34
source:
miRNEST
Taxonomy by NCBI:
Solanum tuberosum
Solanum
Solaneae
Solanoideae
Solanaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AATGGGACGGAGGGAGTACTT
miRNA*
CTACTCCCTCCGTCCCATTTT
mismatches:
3
bulges:
0
View larger
pre-miRNA
ATTTATGTATATT
CTACTCCCTCCGTCCCATTTT
ATGTGGCACCATTTCCTTTTTGGTCAGTCCCAAAAAGAATGTCACATTTTCTTATATGGTAAGTAT
TTAAAGGTACAATTCCTCTTTTACCCTTGTTGGTTCCACTTAATCTTAAAGAAAGTATTCCAATACATTTATGAGGAGAGAGAAAAATGAGTCTACTTTT
TAATATGACTATTTTTTGAAGGGACAATTTGGTAAACATTTCAAAGTCTTCATTTATTTCTTAAACTCCGTGCCCGGTCAAATGTTGCCACATAA
AATGG
GACGGAGGGAGTACTT
AATTTGTTTC
dot-bracket secondary structure
.............
.((((((((((((((((((((
((((((((.(((((.((((((((......))))))))..((((....((((....(((((..((((
(.(((((((..((((.((((((.((..((((((....((((..(((...)))))))...))))))((....)).)).)))))).....)))).)))))))
.))))).))))).....)))).))))(((.((((....................................)))).))).))))).))))))))))
)))))
)))))))))))))...
..........
SIMILARITIES
miRBase
osa-MIR812h
:
0.00007
PMRD
osa-miR812h
:
0.00007
microPC
no hits
UniProt
no hits
RFAM
MIR1122: 0.00002
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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