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ABOUT THIS RECORD

ID: MNEST007400
species: Solanum tuberosum
miRNA family: MIR394
source: miRNEST

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AGGTGGGCATACTGCCAATAG

miRNA*
 TTGGCATTCTGTCCACCTCC

mismatches: 4
bulges: 0
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pre-miRNA
 GTTTCATGGAGGTTTGACAAAGGTTTCTTACAGAGTTCATTGGCATTCTGTCCACCTCCCTCGGTTCTTTTTCGAAAAAAGGAGGAGGAAAGCAAGATTA
ATGTGGAGGTGGGCATACTGCCAATAGAGCTGTGTTGGTTTCTCTTTGTAAAACCCTCATGATACATCAAG

dot-bracket secondary structure
((.((((((.(((((.(((((((...((.(((.((((((((((((...(((((((((((..((.(((((((((........)))))))))..........
.)).)))))))))))...))))))).))))).))).))....))))))).))))).)))))).))......


SIMILARITIES
miRBase ptc-MIR394b: 0.000000000000002

PMRD ptc-miRf10096-akr: 0.000000000002

microPC miR394: 9e-43		UniProt no hits

RFAM MIR394: 0.00000004		most similar mature miRNAs

Identical with: miR394 from microPC (MNEST045025)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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