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ABOUT THIS RECORD
ID:
MNEST007445
species:
Gadus morhua
miRNA family:
miR-223
source:
miRNEST
Taxonomy by NCBI:
Gadus morhua
Gadus
Gadidae
Gadiformes
Paracanthopterygii
Holacanthopterygii
Euacanthomorpha
Acanthomorpha
Ctenosquamata
Eurypterygii
Neoteleostei
Neognathi
Euteleostei
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGTGTATTTGACAAGCTGAGC
miRNA*
GTGTCAGTTTGTCAAATACCCCAA
mismatches:
4
bulges:
0
View larger
pre-miRNA
TCAGGAGGCGGCGTCCCACTT
AGTGTATTTGACAAGCTGAGC
TGGACACTAAAAGACAGA
GTGTCAGTTTGTCAAATACCCCAA
GTGAGACGTCACTAGT
CT
dot-bracket secondary structure
..(((.((.((((((.(((((
...((((((((((((((((.(
((............))).
...))))))))))))))))...))
))).)))))).))..)
))
SIMILARITIES
miRBase
xtr-mir-223
:
1e-18
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-223: 0.00000000000002
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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