miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST007445
species: Gadus morhua
miRNA family: miR-223
source: miRNEST

Taxonomy by NCBI:
Gadus morhua Gadus Gadidae Gadiformes Paracanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGTGTATTTGACAAGCTGAGC

miRNA*
GTGTCAGTTTGTCAAATACCCCAA

mismatches: 4
bulges: 0

View larger
pre-miRNA
TCAGGAGGCGGCGTCCCACTTAGTGTATTTGACAAGCTGAGCTGGACACTAAAAGACAGAGTGTCAGTTTGTCAAATACCCCAAGTGAGACGTCACTAGT
CT


dot-bracket secondary structure
..(((.((.((((((.(((((...((((((((((((((((.(((............)))....))))))))))))))))...))))).)))))).))..)
))



SIMILARITIES
miRBase xtr-mir-223: 1e-18

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-223: 0.00000000000002
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;