ABOUT THIS RECORDspecies: Schistosoma mansoni
miRNA family: miR-1502c
source: miRNEST
Taxonomy by NCBI:
Schistosoma mansoni Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAAACATTACCATGAAAAAGT miRNA* TTATTCATTGAAAACGTTTATG mismatches: 5 bulges: 1 |
pre-miRNA
TTGACAGAAAGAAAGTTATCGTAAACATTACCATGAAAAAGTCTCAGAAGATTGTAGTTGTCATTGTTTCAAGTGAAACTAGGTCATCAGTGTACTTCAT
CTAATAAGAACTAAAGAGTCAGTCGATCCTTACTAAATCAAGCAAAGAAAATGTTGCATTTTGGAGCTTATTCATTGAAAACGTTTATGGAAGCG
dot-bracket secondary structure
..............(((.((((((((.((...(((((.((((.((((((((((.((((.((..(((((..(((((..(((........))).)))))...
..)))))..))..(((.(((....))).)))))))))))..((((........)))).)))))).)))).)))))....)).)))))))).))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTGACAGAAAGAAAGTTATCGTAAACATTACCATGAAAAAGTCTCAGAAGATTGTAGTTGTCATTGTTTCAAGTGAAACTAGGTCATCAGTGTACTTCAT
CTAATAAGAACTAAAGAGTCAGTCGATCCTTACTAAATCAAGCAAAGAAAATGTTGCATTTTGGAGCTTATTCATTGAAAACGTTTATGGAAGCG
dot-bracket secondary structure
..............(((.((((((((.((...(((((.((((.((((((((((.((((.((..(((((..(((((..(((........))).)))))...
..)))))..))..(((.(((....))).)))))))))))..((((........)))).)))))).)))).)))))....)).)))))))).))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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