ABOUT THIS RECORDspecies: Ixodes scapularis
miRNA family: mir-1322
source: miRNEST
Taxonomy by NCBI:
Ixodes scapularis Ixodes Ixodinae Ixodidae Ixodoidea Ixodida Parasitiformes Acari Arachnida Chelicerata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCTGCTGCTGCTGATGCTGGC miRNA* CGCAACACCACCAGCAGCGG mismatches: 3 bulges: 1 |
pre-miRNA
CGTCGGTGCCGCAACACCACCAGCAGCGGCCACCACCACCCAGTCCGCTGCTGCTGCTGATGCTGGCGCCACTGCC
dot-bracket secondary structure
....(((((((((.((.((.((((((((((............).))))))))).)).)).))).))))))......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CGTCGGTGCCGCAACACCACCAGCAGCGGCCACCACCACCCAGTCCGCTGCTGCTGCTGATGCTGGCGCCACTGCC
dot-bracket secondary structure
....(((((((((.((.((.((((((((((............).))))))))).)).)).))).))))))......
SIMILARITIES| miRBase no hits PMRD osa-miRf10290-akr: 0.0008 microPC no hits | UniProt no hits RFAM mir-598: 0.0002 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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