ABOUT THIS RECORDspecies: Vigna unguiculata
miRNA family: MIR156
source: miRNEST
Taxonomy by NCBI:
Vigna unguiculata Vigna Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGACAGAAGAGAGTGAGCACA miRNA* TGCTCACTTCTCTTTCTGTCAAC mismatches: 1 bulges: 2 |
pre-miRNA
AACATAGAAATTGACAGAAGAGAGTGAGCACACAGAGGCACCTGGTATAGTCATACACTGTTACTTTTGCGTGCTCACTTCTCTTTCTGTCAACTTCCAG
TG
dot-bracket secondary structure
......(((.(((((((((((((((((((((.((((((....((((.((....)).))))...)))))).)))))))).)))).))))))))).)))...
..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AACATAGAAATTGACAGAAGAGAGTGAGCACACAGAGGCACCTGGTATAGTCATACACTGTTACTTTTGCGTGCTCACTTCTCTTTCTGTCAACTTCCAG
TG
dot-bracket secondary structure
......(((.(((((((((((((((((((((.((((((....((((.((....)).))))...)))))).)))))))).)))).))))))))).)))...
..
SIMILARITIES| miRBase tcc-MIR156g: 6e-27 PMRD ptc-miR156e: 0.00000000000009 microPC miR156: 1e-40 | UniProt no hits RFAM mir-156: 0.000000000006 | most similar mature miRNAs |
Identical with: miR156 from microPC (MNEST045314) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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