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ABOUT THIS RECORD
ID:
MNEST007529
species:
Vigna unguiculata
miRNA family:
miR172c
source:
miRNEST
Taxonomy by NCBI:
Vigna unguiculata
Vigna
Phaseoleae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GTAGCATCATCAAGATTCACA
miRNA*
TGAGAATCTTGATGATGCTGCAT
mismatches:
0
bulges:
2
View larger
pre-miRNA
TTCACAGTCGTTGTTTGCGGAT
GTAGCATCATCAAGATTCACA
TGCAAACGAAGGTGGATGGGACTGTGATGCAATCTAACCGCTCGTCTTTTTGATG
TG
AGAATCTTGATGATGCTGCAT
CAGCCATAAACGACTTTAA
dot-bracket secondary structure
.....(((((((....((.(((
(((((((((((((((((((((
(.((((.((.(((((...(((.(((...))).)))..)))))..))..)))))))
))
)..))))))))))))))))))
).))....)))))))....
SIMILARITIES
miRBase
gma-MIR172b
:
1e-38
PMRD
gma-miR172b
:
1e-38
microPC
miR172
:
0.000007
UniProt
no hits
RFAM
mir-172: 0.000000000009
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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