ABOUT THIS RECORDspecies: Vigna unguiculata
miRNA family: MIR169
source: miRNEST
Taxonomy by NCBI:
Vigna unguiculata Vigna Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAGCCAAGGATGACTTGCCGG miRNA* GGCAAGTGGTTCTTGGCTACG mismatches: 2 bulges: 0 |
pre-miRNA
TAACAGAGAGTGATGCAGCCAAGGATGACTTGCCGGCGTTATGCTGCATGATGCTTTTTACGGCGACTTTGCCGGCAAGTGGTTCTTGGCTACGTTTGGCT
CTTT
dot-bracket secondary structure
)....((((((((((.((((((((((.(((((((((((...(((((..............)))))....))))))))))).)))))))))).))))..)))
))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TAACAGAGAGTGATGCAGCCAAGGATGACTTGCCGGCGTTATGCTGCATGATGCTTTTTACGGCGACTTTGCCGGCAAGTGGTTCTTGGCTACGTTTGGCT
CTTT
dot-bracket secondary structure
)....((((((((((.((((((((((.(((((((((((...(((((..............)))))....))))))))))).)))))))))).))))..)))
))).
SIMILARITIES| miRBase gma-MIR169a: 6.0E-15 PMRD gma-miR169a: 6.0E-15 microPC miR169: 1.0E-37 | UniProt no hits RFAM 2MIR169_2: 1.0E-6 | most similar mature miRNAs |
Identical with: miR169 from microPC (MNEST044882) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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