ABOUT THIS RECORDspecies: Vigna unguiculata
miRNA family: MIR399
source: miRNEST
Taxonomy by NCBI:
Vigna unguiculata Vigna Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGCCAAAGGAGAATTGCCCTG miRNA* GTGTGATTCTCCCTTGGCAGG mismatches: 2 bulges: 0 |
pre-miRNA
CTTCAATTTCAGAGGTAGAGAAGAATAACAGTGTGATTCTCCCTTGGCAGGTGCTACATCTATTCTTCATCAGAATGGCCTTTCTGCCAAAGGAGAATTG
CCCTGCCATTCTACAGTCCTACCATCTTGCCA
dot-bracket secondary structure
..........((((((((.(((((((..(((.((((((((((.((((((((........(((((((.....)))))))....)))))))).)))))))))
).)))..)))))....))))))).))).....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTTCAATTTCAGAGGTAGAGAAGAATAACAGTGTGATTCTCCCTTGGCAGGTGCTACATCTATTCTTCATCAGAATGGCCTTTCTGCCAAAGGAGAATTG
CCCTGCCATTCTACAGTCCTACCATCTTGCCA
dot-bracket secondary structure
..........((((((((.(((((((..(((.((((((((((.((((((((........(((((((.....)))))))....)))))))).)))))))))
).)))..)))))....))))))).))).....
SIMILARITIES| miRBase sbi-MIR399h: 0.000000007 PMRD sbi-miR399h: 0.000000007 microPC miR399: 0.00003 | UniProt no hits RFAM mir-399: 0.0000001 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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