ABOUT THIS RECORDspecies: Vigna unguiculata
miRNA family: MIRf772
source: miRNEST
Taxonomy by NCBI:
Vigna unguiculata Vigna Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTGCTCTCTATTCTTCTGTCA miRNA* ACAGAAGATAGAGAGCACAG mismatches: 0 bulges: 1 |
pre-miRNA
ATGCTGTTGACAGAAGATAGAGAGCACAGATGATGAAATGCATGAAAGGAAATTGCATCTCGCTCCTTTGTGCTCTCTATTCTTCTGTCATCACCC
dot-bracket secondary structure
....((.(((((((((((((((((((((((.(((((.(((((...........))))).))).)).))))))))))))).)))))))))).))...
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATGCTGTTGACAGAAGATAGAGAGCACAGATGATGAAATGCATGAAAGGAAATTGCATCTCGCTCCTTTGTGCTCTCTATTCTTCTGTCATCACCC
dot-bracket secondary structure
....((.(((((((((((((((((((((((.(((((.(((((...........))))).))).)).))))))))))))).)))))))))).))...
SIMILARITIES| miRBase gma-MIR156e: 7e-36 PMRD gma-miR156e: 7e-36 microPC miR157: 7e-42 | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: miR157 from microPC (MNEST045761) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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