ABOUT THIS RECORDspecies: Vigna unguiculata
miRNA family: miR399e
source: miRNEST
Taxonomy by NCBI:
Vigna unguiculata Vigna Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGGCTTCTCTTTGTTGGCAGG miRNA* TGCCAAAGGAGAGTTGCCCTG mismatches: 3 bulges: 0 |
pre-miRNA
AATCACTCATAGGGCTTCTCTTTGTTGGCAGGAAATGACATGATCATCTCATGAAATATCTTGCCAAAGGAGAGTTGCCCTGTTGCTGCT
dot-bracket secondary structure
........(((((((..((((((.(((((((((.((..(((((.....)))))..)).))))))))).))))))..))))))).......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AATCACTCATAGGGCTTCTCTTTGTTGGCAGGAAATGACATGATCATCTCATGAAATATCTTGCCAAAGGAGAGTTGCCCTGTTGCTGCT
dot-bracket secondary structure
........(((((((..((((((.(((((((((.((..(((((.....)))))..)).))))))))).))))))..))))))).......
SIMILARITIES| miRBase pvu-MIR399a: 4e-34 PMRD pvu-miR399a: 4e-34 microPC miR399: 6e-36 | UniProt no hits RFAM mir-399: 0.0000000000003 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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