miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST007542
species: Vigna unguiculata
miRNA family: MIRf661
source: miRNEST

Taxonomy by NCBI:
Vigna unguiculata Vigna Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGCCAAAGGAGAGTTGCCCT

miRNA*
 GGCTTCTCTTTGTTGGCAGGA

mismatches: 3
bulges: 0
View larger
pre-miRNA
 AAATCACTCATAGGGCTTCTCTTTGTTGGCAGGAAATGACATGATCATCTCATGAAATATCTTGCCAAAGGAGAGTTGCCCTGTTGCTGCTT

dot-bracket secondary structure
.........(((((((..((((((.(((((((((.((..(((((.....)))))..)).))))))))).))))))..)))))))........


SIMILARITIES
miRBase pvu-MIR399a: 1e-34

PMRD pvu-miR399a: 1e-34

microPC miR399: 6e-36		UniProt no hits

RFAM mir-399: 0.0000000000003		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;