ABOUT THIS RECORDspecies: Hydra vulgaris
miRNA family: miR-190
source: miRNEST
Taxonomy by NCBI:
Hydra vulgaris Hydra Hydridae Anthomedusae Hydroida Hydrozoa Cnidaria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACTATATATCAACCATATTTC miRNA* TATATTCGATTGATACGTAGTTG mismatches: 4 bulges: 2 |
pre-miRNA
CGATGATTACGTCGTTTCAACGTTGATCTAACGTCTTGTCGACTATATATCAACCATATTTCAACTTTGAATAGGTGATATATTCGATTGATACGTAGTT
GATAGGACGTTAGAACAACGTTGAAACAACGTAAATTCA
dot-bracket secondary structure
.((...((((((.((((((((((((.((((((((((((((((((((.((((((..((((.(((.(((.....)))))).))))....)))))).))))))
)))))))))))))).)))))))))))).))))))..)).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CGATGATTACGTCGTTTCAACGTTGATCTAACGTCTTGTCGACTATATATCAACCATATTTCAACTTTGAATAGGTGATATATTCGATTGATACGTAGTT
GATAGGACGTTAGAACAACGTTGAAACAACGTAAATTCA
dot-bracket secondary structure
.((...((((((.((((((((((((.((((((((((((((((((((.((((((..((((.(((.(((.....)))))).))))....)))))).))))))
)))))))))))))).)))))))))))).))))))..)).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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