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ABOUT THIS RECORD

ID: MNEST007568
species: Macaca fascicularis
miRNA family: miR-1285
source: miRNEST

Taxonomy by NCBI:
Macaca fascicularis Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTGGGCAACATAGCCAGACTT

miRNA*
GAATGGCGTGAACCCGGGA

mismatches: 4
bulges: 2

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pre-miRNA
TACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCTGAGATCCGGCCACTGCACTCCAGCCTGGGCAACATAGCC
AGACTT
CGTCTCAAAAATAAAAAAA


dot-bracket secondary structure
............((((((.((((..(((((((..((((((....((((..(((((((.((((.....)))))))))))))))..))))))...))).)))
)..)))
)))))))............



SIMILARITIES
miRBase ppy-mir-1273: 1e-19

PMRD ptc-miRf12524-akr: 0.0000000000001

microPC no hits
UniProt sp|Q86U02|CN165_HUMAN: 0.000000002

RFAM Metazoa_SRP: 4e-41
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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