ABOUT THIS RECORDspecies: Macaca fascicularis
miRNA family: miR-3652
source: miRNEST
Taxonomy by NCBI:
Macaca fascicularis Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CGGCTGGAGGTGTGAGGATCC miRNA* GTGCTGGGCCTCTGCTGCG mismatches: 3 bulges: 2 |
pre-miRNA
GGCGGACCGCGCGGCTGGAGGTGTGAGGATCCAAGCTTAGGGGTGGGGGTGGAGGCGGCTCCTGCGATCGAGAGGGACTTGAGACTCACCGGCCGCACGC
CATGACTGCCCTGTGGGTGCTGGGCCTCTGCTGCGTCCTGCTG
dot-bracket secondary structure
(((((...(((((((.((((((...((.(((((......(((((((.((((...((((((..((...(((((.....)))))....))..)))))).)))
)....))))))).))))).))..))))))))))))).))))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GGCGGACCGCGCGGCTGGAGGTGTGAGGATCCAAGCTTAGGGGTGGGGGTGGAGGCGGCTCCTGCGATCGAGAGGGACTTGAGACTCACCGGCCGCACGC
CATGACTGCCCTGTGGGTGCTGGGCCTCTGCTGCGTCCTGCTG
dot-bracket secondary structure
(((((...(((((((.((((((...((.(((((......(((((((.((((...((((((..((...(((((.....)))))....))..)))))).)))
)....))))))).))))).))..))))))))))))).))))).
SIMILARITIES| miRBase hsa-mir-3652: 2e-46 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
