ABOUT THIS RECORDspecies: Macaca fascicularis
miRNA family: mir-675
source: miRNEST
Taxonomy by NCBI:
Macaca fascicularis Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTGTATGCCCTCACCGCTCAG miRNA* GGTGCGGAGAGGGCCCACAGTG mismatches: 3 bulges: 1 |
pre-miRNA
GCCCAGGGTCTGGTGCGGAGAGGGCCCACAGTGGACTTGGTGACACTGTATGCCCTCACCGCTCAGCCCCTGGG
dot-bracket secondary structure
.(((((((.((((.((((.((((((..((((((..........))))))..)))))).)))))))).)))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GCCCAGGGTCTGGTGCGGAGAGGGCCCACAGTGGACTTGGTGACACTGTATGCCCTCACCGCTCAGCCCCTGGG
dot-bracket secondary structure
.(((((((.((((.((((.((((((..((((((..........))))))..)))))).)))))))).)))))))
SIMILARITIES| miRBase mml-mir-675: 5e-36 PMRD no hits microPC no hits | UniProt no hits RFAM mir-675: 3e-25 | most similar mature miRNAs |
Identical with: mml-mir-675 from miRBase (MNEST028110) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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