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ABOUT THIS RECORD

ID: MNEST007645
species: Anolis carolinensis
miRNA family: let-7
source: miRNEST

Taxonomy by NCBI:
Anolis carolinensis Anolis Polychrotinae Iguanidae Iguania Squamata Lepidosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAGGTAGTAGGTTGTATAGT

miRNA*
TATACAATCTACTGTCTTTCC

mismatches: 1
bulges: 0

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pre-miRNA
GTCCTTTGGGGTGAGGTAGTAGGTTGTATAGTTTTAGGGTTCTGCCCTGCCTGTCACATAACTATACAATCTACTGTCTTTCCTGAAGTGC

dot-bracket secondary structure
((.(((((((..(((((((((((((((((((((.((((((...))))))..........))))))))))))))))))))).))))))).))


SIMILARITIES
miRBase tgu-let-7a-1: 3e-38

PMRD no hits

microPC no hits
UniProt no hits

RFAM let-7: 1e-22
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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