ABOUT THIS RECORDspecies: Anolis carolinensis
miRNA family: mir-31
source: miRNEST
Taxonomy by NCBI:
Anolis carolinensis Anolis Polychrotinae Iguanidae Iguania Squamata Lepidosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGCAAGATGTTGGCATAGCTG miRNA* GCTATGCCAACATATTGCCCT mismatches: 3 bulges: 0 |
pre-miRNA
AGAGCTGGAGCGGAGGCAAGATGTTGGCATAGCTGATGAGTTAAGAACCTGCTATGCCAACATATTGCCCTCTTTCCTGTCT
dot-bracket secondary structure
...((.((((.((.(((((.(((((((((((((......(((...)))..))))))))))))).))))).)).)))).))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AGAGCTGGAGCGGAGGCAAGATGTTGGCATAGCTGATGAGTTAAGAACCTGCTATGCCAACATATTGCCCTCTTTCCTGTCT
dot-bracket secondary structure
...((.((((.((.(((((.(((((((((((((......(((...)))..))))))))))))).))))).)).)))).))..
SIMILARITIES| miRBase tgu-mir-31: 1e-24 PMRD no hits microPC no hits | UniProt no hits RFAM mir-31: 3e-38 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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