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ABOUT THIS RECORD

ID: MNEST007667
species: Anolis carolinensis
miRNA family: miR-122
source: miRNEST

Taxonomy by NCBI:
Anolis carolinensis Anolis Polychrotinae Iguanidae Iguania Squamata Lepidosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AAACGCCATTATCACACTAAA

miRNA*
GAGTGTGACAATGGTGTTTGT

mismatches: 3
bulges: 0

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pre-miRNA
CTTCTTTCCTGCTGGAGCTGTGGAGTGTGACAATGGTGTTTGTATCCAATCCGTCAAACGCCATTATCACACTAAATAGCTACTGCTAGAGAAGC

dot-bracket secondary structure
(((((((...((...((((((..(((((((.(((((((((((.((.......))))))))))))).)))))))..))))))...)).))))))).


SIMILARITIES
miRBase gga-mir-122-1: 1e-27

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-122: 3e-35
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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