ABOUT THIS RECORDspecies: Trichosurus vulpecula
miRNA family: miR-2444
source: miRNEST
Taxonomy by NCBI:
Trichosurus vulpecula Trichosurus Phalangeridae Diprotodontia Metatheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTGTGATGTTTTTTGTTTTN miRNA* GAGNAAAAGACAATTACAATTA mismatches: 3 bulges: 1 |
pre-miRNA
TATTGAGGGATTTTGTGATGTTTTTTGTTTTNNGTTTTTGTTACTGTTTTTTTAATTTTGCTCCCTGGCTGTGTTTATGGAGGAGGGTGGGATAGATTAA
TCAAATAAATGTTTGTTGATGAGGAGNAAAAGACAATTACAATTACCAAAAAA
dot-bracket secondary structure
......((....((((((((((((((.((((..(((..((..(((((((..(((((((..((((((..((...........)).))).)))..)))))))
..)))))...)).))..)))..)))).))))))).)))))))...))......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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TATTGAGGGATTTTGTGATGTTTTTTGTTTTNNGTTTTTGTTACTGTTTTTTTAATTTTGCTCCCTGGCTGTGTTTATGGAGGAGGGTGGGATAGATTAA
TCAAATAAATGTTTGTTGATGAGGAGNAAAAGACAATTACAATTACCAAAAAA
dot-bracket secondary structure
......((....((((((((((((((.((((..(((..((..(((((((..(((((((..((((((..((...........)).))).)))..)))))))
..)))))...)).))..)))..)))).))))))).)))))))...))......
SIMILARITIES| miRBase eca-mir-545: 0.0005 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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