ABOUT THIS RECORDspecies: Trichosurus vulpecula
miRNA family: mir-1271
source: miRNEST
Taxonomy by NCBI:
Trichosurus vulpecula Trichosurus Phalangeridae Diprotodontia Metatheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGCCTACTATGTGCCAGGCCT miRNA* GTTTTGGCATAAAGTAAAATGT mismatches: 5 bulges: 1 |
pre-miRNA
ACTTGTTTCTAGGTTTTGGCATAAAGTAAAATGTGAGTTACTTACTTGAATCAGTTCTTTTCCTTGTTATTTCATAGGTGGAGAGTTTCAGGAAGATAAG
TCAGTCAACTAACATTTATTAAGTGCCTACTATGTGCCAGGCCTTGATTAACG
dot-bracket secondary structure
....(((((.((((((.((((((.((((((((((.(((((((.(((((..((....(((((((((((......))))).))))))......))...))))
).))).)))).))))))..........)))).)))))))))))).))..))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
ACTTGTTTCTAGGTTTTGGCATAAAGTAAAATGTGAGTTACTTACTTGAATCAGTTCTTTTCCTTGTTATTTCATAGGTGGAGAGTTTCAGGAAGATAAG
TCAGTCAACTAACATTTATTAAGTGCCTACTATGTGCCAGGCCTTGATTAACG
dot-bracket secondary structure
....(((((.((((((.((((((.((((((((((.(((((((.(((((..((....(((((((((((......))))).))))))......))...))))
).))).)))).))))))..........)))).)))))))))))).))..))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
