ABOUT THIS RECORDspecies: Trichosurus vulpecula
miRNA family: miR-1549
source: miRNEST
Taxonomy by NCBI:
Trichosurus vulpecula Trichosurus Phalangeridae Diprotodontia Metatheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTCCGCCCTGCAAGCCCGGTA miRNA* CCGGGCTCGAGGGTAGAAGC mismatches: 4 bulges: 1 |
pre-miRNA
AAACTTGTTTGTTGTTACTCCGCCGGGCTCGAGGGTAGAAGCTCTGTTTATTTTTGCTTCCGCCCTGCAAGCCCGGTAGCTGGTAACAAATTTGAAG
dot-bracket secondary structure
(((....))).((((((((..((((((((..(((((.(((((.............))))).)))))...))))))))....))))))))........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AAACTTGTTTGTTGTTACTCCGCCGGGCTCGAGGGTAGAAGCTCTGTTTATTTTTGCTTCCGCCCTGCAAGCCCGGTAGCTGGTAACAAATTTGAAG
dot-bracket secondary structure
(((....))).((((((((..((((((((..(((((.(((((.............))))).)))))...))))))))....))))))))........
SIMILARITIES| miRBase mdo-mir-1549: 0.00000000000002 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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