miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST007699
species: Trichosurus vulpecula
miRNA family: miR-877
source: miRNEST

Taxonomy by NCBI:
Trichosurus vulpecula Trichosurus Phalangeridae Diprotodontia Metatheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TATCCTCTTCTTCCTCCTCCT

miRNA*
 GGAGAGGAAGTAAAGAGGTGACT

mismatches: 4
bulges: 2
View larger
pre-miRNA
 TCAACTTTGGAGGGAGAGGAAGTAAAGAGGTGACTTAGGAATAGCATCACCAAAGGGACAAAAAAAGAAGAAAGAAAAAGAAAATTCATTGTTTTTGAAA
CGCATAGGACACAAAAANNCCTAAAAGAATGATGGATAAGCNNAGCTTAGAAAGTACATTATCATCACCATTATCCTCTTCTTCCTCCTCCTCATCATCA
C

dot-bracket secondary structure
.........(((((.(((((((..((((((........((...((....((....)).((((((..((.(((............))).)).))))))...
.)).((((...........))))...((.(((((..(((((...))))).......))))))).))........))))))))))))).))))).......
.


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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