ABOUT THIS RECORDspecies: Trichosurus vulpecula
miRNA family: miR-2818
source: miRNEST
Taxonomy by NCBI:
Trichosurus vulpecula Trichosurus Phalangeridae Diprotodontia Metatheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAAGGGAAGACATCTGTATGC miRNA* ATTCAGTGACTTCCCTGGAA mismatches: 5 bulges: 1 |
pre-miRNA
GGGCGCAGCGTCAAGGGAAGACATCTGTATGCCCTGGAATTCAGTGACTTCCCTGGAATGCATGAG
dot-bracket secondary structure
....(((...((.(((((((.((.(((.((........)).))))).))))))).)).))).....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GGGCGCAGCGTCAAGGGAAGACATCTGTATGCCCTGGAATTCAGTGACTTCCCTGGAATGCATGAG
dot-bracket secondary structure
....(((...((.(((((((.((.(((.((........)).))))).))))))).)).))).....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q2KJ83|CBPN_BOVIN: 0.00004 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
