ABOUT THIS RECORDspecies: Trichosurus vulpecula
miRNA family: mir-103
source: miRNEST
Taxonomy by NCBI:
Trichosurus vulpecula Trichosurus Phalangeridae Diprotodontia Metatheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGCAGCATTGTACAGTGCTGG miRNA* ATCACTGTGCAGTGTGCATG mismatches: 2 bulges: 1 |
pre-miRNA
TACATTCCTCCCATCACTGTGCAGTGTGCATGCAGTTTGTTCGAAAAGAAAATTTACTGTCTTTGGCTTGTCAGCACCAGTTTTGCCGAAGCTGTGGGGA
GCAGCATTGTACAGTGCTGGTAAAAGACG
dot-bracket secondary structure
..........(((.(((((((((((((((..(((((...(((.....))).....)))))((.(((((..((.(((.......))).))))))).))...
))).)))))))))))).))).........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TACATTCCTCCCATCACTGTGCAGTGTGCATGCAGTTTGTTCGAAAAGAAAATTTACTGTCTTTGGCTTGTCAGCACCAGTTTTGCCGAAGCTGTGGGGA
GCAGCATTGTACAGTGCTGGTAAAAGACG
dot-bracket secondary structure
..........(((.(((((((((((((((..(((((...(((.....))).....)))))((.(((((..((.(((.......))).))))))).))...
))).)))))))))))).))).........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q9Z1K6|ARI2_MOUSE: 1e-17 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
