ABOUT THIS RECORDspecies: Papio anubis
miRNA family: mir-548
source: miRNEST
Taxonomy by NCBI:
Papio anubis Papio Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AAAAGTAATTGTGGTTTTTGC miRNA* AGAAACCACAGTTACTGTTGT mismatches: 1 bulges: 0 |
pre-miRNA
GGCAAGTTATTAGGTTAGTGCAAAAGTAATTGTGGTTTTTGCCATACTTTTAATGGCAGAAACCACAGTTACTGTTGTACCAACCTAATAGCAAAC
dot-bracket secondary structure
.....(((((((((((.((((((.(((((((((((((((((((((.......))))))))))))))))))))).)))))).)))))))))))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GGCAAGTTATTAGGTTAGTGCAAAAGTAATTGTGGTTTTTGCCATACTTTTAATGGCAGAAACCACAGTTACTGTTGTACCAACCTAATAGCAAAC
dot-bracket secondary structure
.....(((((((((((.((((((.(((((((((((((((((((((.......))))))))))))))))))))).)))))).)))))))))))....
SIMILARITIES| miRBase hsa-mir-548aa-2: 5e-18 PMRD no hits microPC no hits | UniProt no hits RFAM mir-548: 4e-19 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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