ABOUT THIS RECORDspecies: Papio anubis
miRNA family: mir-515
source: miRNEST
Taxonomy by NCBI:
Papio anubis Papio Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTTTAGAGGGAAGCACTTTCT miRNA* AATGTGCATCCTTTCAGAGGG mismatches: 3 bulges: 0 |
pre-miRNA
TGCTGTGACCCTTTAGAGGGAAGCACTTTCTGTTGTCTGAAAACAAAGAATGTGCATCCTTTCAGAGGGTTACTCT
dot-bracket secondary structure
....((((((((((.((((((.((((.((((.((((......)))))))).)))).)))))).))))))))))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
TGCTGTGACCCTTTAGAGGGAAGCACTTTCTGTTGTCTGAAAACAAAGAATGTGCATCCTTTCAGAGGGTTACTCT
dot-bracket secondary structure
....((((((((((.((((((.((((.((((.((((......)))))))).)))).)))))).))))))))))...
SIMILARITIES| miRBase ptr-mir-526a-2: 4e-21 PMRD no hits microPC no hits | UniProt no hits RFAM mir-515: 1e-36 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
