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ABOUT THIS RECORD
ID:
MNEST007768
species:
Ictalurus furcatus
miRNA family:
miR-1401
source:
miRNEST
Taxonomy by NCBI:
Ictalurus furcatus
Ictalurus
Ictaluridae
Siluriformes
Siluriphysi
Otophysi
Ostariophysi
Otocephala
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGGCCCATGGCAGTCAGAGAC
miRNA*
ACTCTGATGATTTGTGGATTCC
mismatches:
4
bulges:
2
View larger
pre-miRNA
CAGGTCTCCTATAGTGACCAGC
ACTCTGATGATTTGTGGATTCC
CAGGGGTCTCTGCTCTTTTCACGTGCACAGAGAAACCCTGTAC
AGGCCCATGGCAG
TCAGAGAC
TAGGTTATATTCACAAGTG
dot-bracket secondary structure
.(((...)))...((((((((.
.(((((((...((((((.((..
(((((.((((((...............))))))..)))))...
))..))))))..)
)))))).)
).))))))...........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record