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ABOUT THIS RECORD

ID: MNEST007777
species: Lepeophtheirus salmonis
miRNA family: miR-2831
source: miRNEST

Taxonomy by NCBI:
Lepeophtheirus salmonis Lepeophtheirus Caligidae Siphonostomatoida Podoplea Neocopepoda Copepoda Maxillopoda Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CACAAACAAAGCATTTTTTTC

miRNA*
AATGAATGCAATTGTTGTTGTT

mismatches: 5
bulges: 1

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pre-miRNA
TCCCACACCTCCCCCTGAACCTGAAACATAAAATGAATGCAATTGTTGTTGTTAACTTGTTTATTGCAGCTTATAACGGTTACAAATAAAGCAATACCAT
CACAAATTTCACAAACAAAGCATTTTTTTCACTGCATTCTAGTTGCGGTTTGTCCAAAC


dot-bracket secondary structure
..............................(((.((((((..(((((..((..((.((((.((((((...((((...........)))).))))))....
.)))).)).))..))))).)))))).))).((((((.......))))))..........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM SVLPA: 2e-19
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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