ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: miR-3198
source: miRNEST
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTGGAGTCCTGGGGAATGGAGA miRNA* ACTGTTCACCCAGCACTAGCAG mismatches: 3 bulges: 2 |
pre-miRNA
CTGTTTTGTGGACTCTGCTCTCACTGTTCACCCAGCACTAGCAGTACCAGATGGTTCTGTGGAGTCCTGGGGAATGGAGAGAGCACAGTCTGACTCCC
dot-bracket secondary structure
)........(((((.(((((((.((((((.(((((.(((.((((.(((....))).))))..))).))))))))))).))))))).))))).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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deep sequencing data evidence
CTGTTTTGTGGACTCTGCTCTCACTGTTCACCCAGCACTAGCAGTACCAGATGGTTCTGTGGAGTCCTGGGGAATGGAGAGAGCACAGTCTGACTCCC
dot-bracket secondary structure
)........(((((.(((((((.((((((.(((((.(((.((((.(((....))).))))..))).))))))))))).))))))).))))).......
SIMILARITIES| miRBase hsa-mir-3198-2: 4.0E-40 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: hsa-mir-3198-2 from miRBase (MNEST029368) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
deep sequencing data evidence
