ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-548
source: miRNEST
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAAAAACCGCAATTACNTTTT miRNA* AAGTAATTGAGATTTTTGCT mismatches: 4 bulges: 1 |
pre-miRNA
CATGTAATATTAGATTGACGCAAAAGTAATTGAGATTTTTGCTATCATTTTTAATGGCAAAAACCGCAATTACNTTTTGCACCAACCTATATATGCC
dot-bracket secondary structure
).....(((((((.(((..(((((.(((((((...((((((((((........))))))))))...)))))))..)))))..))).))).))))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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CATGTAATATTAGATTGACGCAAAAGTAATTGAGATTTTTGCTATCATTTTTAATGGCAAAAACCGCAATTACNTTTTGCACCAACCTATATATGCC
dot-bracket secondary structure
).....(((((((.(((..(((((.(((((((...((((((((((........))))))))))...)))))))..)))))..))).))).))))...
SIMILARITIES| miRBase hsa-mir-548c: 1.0E-12 PMRD no hits microPC no hits | UniProt no hits RFAM 8mir-548: 1.0E-16 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record
