ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-548
source: miRNEST
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGCAAAAACCACAATTAMTTA miRNA* ARTAATTGCAGGTTTTGCCAT mismatches: 3 bulges: 2 |
pre-miRNA
GGATGTATTAAGATWGGTGCAAAARTAATTGCAGGTTTTGCCATAAAAGTCATGGCAAAAACCACAATTAMTTATGMACCAACCTAATATATG
dot-bracket secondary structure
).((((((((.....(((.((.((.((((((..(((((((((((.......))))).)))))).)))))).)).)).)))....)))))))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record
GGATGTATTAAGATWGGTGCAAAARTAATTGCAGGTTTTGCCATAAAAGTCATGGCAAAAACCACAATTAMTTATGMACCAACCTAATATATG
dot-bracket secondary structure
).((((((((.....(((.((.((.((((((..(((((((((((.......))))).)))))).)))))).)).)).)))....)))))))).
SIMILARITIES| miRBase hsa-mir-548aa-1: 9.0E-11 PMRD no hits microPC no hits | UniProt no hits RFAM 8mir-548: 8.0E-14 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record
