ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-548
source: miRNEST
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGCAAAAACCACAATTAMTTA miRNA* ARTAATTGCAGGTTTTGCCAT mismatches: 3 bulges: 2 |
pre-miRNA
GATGTATTAAGATWGGTGCAAAARTAATTGCAGGTTTTGCCATAAAAGTCATGGCAAAAACCACAATTAMTTATGMACCAACCTAATATATG
dot-bracket secondary structure
.((((((((.....(((.((.((.((((((..(((((((((((.......))))).)))))).)))))).)).)).)))....)))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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GATGTATTAAGATWGGTGCAAAARTAATTGCAGGTTTTGCCATAAAAGTCATGGCAAAAACCACAATTAMTTATGMACCAACCTAATATATG
dot-bracket secondary structure
.((((((((.....(((.((.((.((((((..(((((((((((.......))))).)))))).)))))).)).)).)))....)))))))).
SIMILARITIES| miRBase hsa-mir-548aa-1: 0.00000000009 PMRD no hits microPC no hits | UniProt no hits RFAM mir-548: 0.00000000000008 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record
