ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-548
source: miRNEST
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAAAACCACAATTACTTATGC miRNA* AAACGTAATTGCAGGTTTTGCC mismatches: 4 bulges: 1 |
pre-miRNA
TATAGATGTATTAAGTTGGTGCAAACGTAATTGCAGGTTTTGCCATAAAACTCATGGCCAAAACCACAATTACTTATGCACCAACCTAATACATGTGT
dot-bracket secondary structure
.(((.((((((((.(((((((((...(((((((..(((((((((((.......)))).))))))).)))))))...))))))))).)))))))).)))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TATAGATGTATTAAGTTGGTGCAAACGTAATTGCAGGTTTTGCCATAAAACTCATGGCCAAAACCACAATTACTTATGCACCAACCTAATACATGTGT
dot-bracket secondary structure
.(((.((((((((.(((((((((...(((((((..(((((((((((.......)))).))))))).)))))))...))))))))).)))))))).)))
SIMILARITIES| miRBase mml-mir-548d: 0.0000000003 PMRD no hits microPC no hits | UniProt no hits RFAM mir-548: 0.000000000001 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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