ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: miR-125b
source: miRNEST
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCACAAGTTAGGGTCTCAGGGA miRNA* CCAAGAGCCTAACCCGTGGAT mismatches: 4 bulges: 1 |
pre-miRNA
ACAAAAGCACGACTCGCAGCTCCCAAGAGCCTAACCCGTGGATTTAAACGGTAAACATCACAAGTTAGGGTCTCAGGGACTGAGAGGAGCGCAACAA
dot-bracket secondary structure
).....((....(((.(((.((((.(((.((((((..((((.((((.....))))..))))..)))))).)))..))))))).)))....)).....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ACAAAAGCACGACTCGCAGCTCCCAAGAGCCTAACCCGTGGATTTAAACGGTAAACATCACAAGTTAGGGTCTCAGGGACTGAGAGGAGCGCAACAA
dot-bracket secondary structure
).....((....(((.(((.((((.(((.((((((..((((.((((.....))))..))))..)))))).)))..))))))).)))....)).....
SIMILARITIES| miRBase age-mir-125b-1: 7.0E-45 PMRD no hits microPC no hits | UniProt no hits RFAM 4lin-4: 1.0E-28 | most similar mature miRNAs |
Identical with: sla-mir-125b from miRBase (MNEST027615), ppy-mir-125b-1 from miRBase , cfa-mir-125b-1 from miRBase , lla-mir-125b-1 from miRBase , age-mir-125b-1 from miRBase , hsa-mir-125b-1 from miRBase , ggo-mir-125b-1 from miRBase , ptr-mir-125b-1 from miRBase , mne-mir-125b-1 from miRBase , mml-mir-125b-1 from miRBase |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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