ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-1282
source: miRNEST
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGTTTGCCTTTTTCTGCTT miRNA* GCAGACTCAGGGCAAAGGGA mismatches: 4 bulges: 2 |
pre-miRNA
AAAGGGACCCGCTGCAGACTCAGGGCAAAGGGAATGCCATCGGTGCTGGGACCTGTGAGCACTACAGGAGGAAACGCGAGCGTGGTGAGGACTGGCTCCA
GGCACACAGGCGAAGGGCAAGAGGGTTGGACACGAAGCCACAAAGCTACTTGGGTTCCTCCTTCTTCTCGTTTGCCTTTTTCTGCTTCTGCTGCATG
dot-bracket secondary structure
..........((.(((((...((((((((((((.((((.((.(((((.(((((.((...((((((................))))))...)).)).))).
)))))...)).....))))((((((..(((..((((((......)))..)))...))).)))))))))).))))))))..)))))....))......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: not a miRNA
Source sequences
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AAAGGGACCCGCTGCAGACTCAGGGCAAAGGGAATGCCATCGGTGCTGGGACCTGTGAGCACTACAGGAGGAAACGCGAGCGTGGTGAGGACTGGCTCCA
GGCACACAGGCGAAGGGCAAGAGGGTTGGACACGAAGCCACAAAGCTACTTGGGTTCCTCCTTCTTCTCGTTTGCCTTTTTCTGCTTCTGCTGCATG
dot-bracket secondary structure
..........((.(((((...((((((((((((.((((.((.(((((.(((((.((...((((((................))))))...)).)).))).
)))))...)).....))))((((((..(((..((((((......)))..)))...))).)))))))))).))))))))..)))))....))......
SIMILARITIES| miRBase eca-mir-1282: 0.00000000000001 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: not a miRNA
Source sequences
download this record
