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ABOUT THIS RECORD
ID:
MNEST008099
species:
Homo sapiens
miRNA family:
mir-548
source:
miRNEST
Taxonomy by NCBI:
Homo sapiens
Homo
Homininae
Hominidae
Hominoidea
Catarrhini
Simiiformes
Haplorrhini
Primates
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AAAAACCACAATTACTTTTGC
miRNA*
AAAAGTAATTGTGGCCTTTGC
mismatches:
5
bulges:
0
View larger
pre-miRNA
TTAGATTGGTGC
AAAAGTAATTGTGGCCTTTGC
CATTACTTTCCATGGCAAAAACCGCAATTACAAAAGCCGCTACTTTCAATAGC
AAAAACCACAATTA
CTTTTGC
ACCAACCTA
dot-bracket secondary structure
.(((.(((((((
((((((((((((((..(((((
(((........))))))))....((..........)).((((.......))))
.....)))))))))
)))))))
))))).)))
SIMILARITIES
miRBase
hsa-mir-548aa-2
:
0.000000000000002
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-548: 1e-16
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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