ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-205
source: miRNEST
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCCTTCATTCCACCGGAGTCT miRNA* ATTTCAGTGGAGTGAAGTTCA mismatches: 3 bulges: 0 |
pre-miRNA
AGATCCTCAGACAATCCATGTGCTTCTCTTGTCCTTCATTCCACCGGAGTCTGTCTCATACCCAACCAGATTTCAGTGGAGTGAAGTTCAGGAGGCATGG
AGCTGACAACCATGAGGC
dot-bracket secondary structure
......((((....(((((((....((((((..(((((((((((.((((((((.............)))))))).)))))))))))..))))))))))))
).))))...((....)).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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deep sequencing data evidence
AGATCCTCAGACAATCCATGTGCTTCTCTTGTCCTTCATTCCACCGGAGTCTGTCTCATACCCAACCAGATTTCAGTGGAGTGAAGTTCAGGAGGCATGG
AGCTGACAACCATGAGGC
dot-bracket secondary structure
......((((....(((((((....((((((..(((((((((((.((((((((.............)))))))).)))))))))))..))))))))))))
).))))...((....)).
SIMILARITIES| miRBase ggo-mir-205: 1e-56 PMRD no hits microPC no hits | UniProt no hits RFAM mir-205: 2e-40 | most similar mature miRNAs |
Identical with: eca-mir-205 from miRBase (MNEST027091) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
deep sequencing data evidence
